A simple graphical method for displaying structured population dynamics and STdiag, its implementation in an R package
Keywords:
Demography, temporal dynamics, long-term studies, graphical displayAbstract
In demography, a detailed study of the temporal dynamics of the structure of a population is often required to better understand the processes that underline its overall dynamics and the individual’s life histories. Heatmaps, using time and structure (such as size-structure) as x and y coordinates and density as colours, are efficient tools for displaying the dynamics of a structured population. Such representations (structure-time diagrams) reveal the data at several levels, from general outlook to fine details. Despite its efficiency, this type of visual display has been scarcely used in ecology and demography. Using the example of springtail populations maintained in the laboratory and a woodlouse population studied in the field, we explain why this type of representation can be used to analyse the population dynamics of soil organisms and why it should be more widely used in demography. We also present the R package STdiag (for ‘Structure Time diagram’), an interface to complex graphical functions to easily produce and analyse such ‘structure-time diagrams’ from raw datasets. This package is available for all operating systems via R-Forge. Its syntax and options are described, discussed and illustrated using our case studies. This graphical display is a simple and efficient way to make large demographic datasets coherent and to disclose the underlying, often hidden, demographical processes.
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